HL_9TJT_002

3D structure

PDB id

9TJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole cmpd6 in the pre-activation state

Experimental method

X-RAY DIFFRACTION

Resolution

2.87 Å

Loop

Sequence

GUUCGC

Length

6 nucleotides

Bulged bases

9TJT|1|B|U|47|||C

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TJT_002 not in the Motif Atlas

Geometric match to HL_6QN3_003

Geometric discrepancy: 0.1081

The information below is about HL_6QN3_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.6

Basepair signature

cWW-tSW-F

Number of instances in this motif group

67

Unit IDs

9TJT|1|B|G|47|||A
9TJT|1|B|U|47|||B
9TJT|1|B|U|47|||C
9TJT|1|B|C|47|||D
9TJT|1|B|G|47|||E
9TJT|1|B|C|47|||F

Current chains

Chain B

tRNA(leu)

Nearby chains

Chain A

Leucine--tRNA ligase