HL_9TKQ_084

3D structure

PDB id

9TKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex bound to compact IF2-GDP (70S IC-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

9TKQ|1|D2|A|2268, 9TKQ|1|D2|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKQ|1|D2|C|2264
9TKQ|1|D2|U|2265
9TKQ|1|D2|A|2266
9TKQ|1|D2|A|2267
9TKQ|1|D2|A|2268
9TKQ|1|D2|G|2269
9TKQ|1|D2|A|2270
9TKQ|1|D2|G|2271
9TKQ|1|D2|U|2272
9TKQ|1|D2|A|2273
9TKQ|1|D2|A|2274
9TKQ|1|D2|C|2275
9TKQ|1|D2|G|2276

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain B0

Large ribosomal subunit protein bL27

Chain BP

50S ribosomal protein L16