HL_9TNL_024

3D structure

PDB id

9TNL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.11 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

9TNL|1|A|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TNL_024 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.3332

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TNL|1|A|G|1134
9TNL|1|A|U|1135
9TNL|1|A|C|1136
9TNL|1|A|C|1137
9TNL|1|A|G|1138
9TNL|1|A|G|1139
9TNL|1|A|C|1140

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

Small ribosomal subunit protein uS9