HL_9TV2_036
3D structure
- PDB id
- 9TV2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- (PSU)UUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9TV2|1|L5|A|3628, 9TV2|1|L5|A|3629, 9TV2|1|L5|U|3630, 9TV2|1|L5|A|3634
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TV2|1|L5|PSU|3625
9TV2|1|L5|U|3626
9TV2|1|L5|U|3627
9TV2|1|L5|A|3628
9TV2|1|L5|A|3629
9TV2|1|L5|U|3630
9TV2|1|L5|U|3631
9TV2|1|L5|A|3632
9TV2|1|L5|A|3633
9TV2|1|L5|A|3634
9TV2|1|L5|A|3635
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain Lj
- Large ribosomal subunit protein eL37
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