HL_9TZ9_044

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TZ9_044 not in the Motif Atlas

Geometric match to HL_9H3G_098

Geometric discrepancy: 0.0891

The information below is about HL_9H3G_098

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

9TZ9|1|a|C|1820
9TZ9|1|a|G|1821
9TZ9|1|a|U|1822
9TZ9|1|a|A|1823
9TZ9|1|a|A|1824
9TZ9|1|a|G|1825

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 9

Large ribosomal subunit protein bL28

Chain o

Large ribosomal subunit protein uL2