HL_9TZ9_065

3D structure

PDB id

9TZ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Empty 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

9TZ9|1|a|U|2812, 9TZ9|1|a|A|2815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TZ9_065 not in the Motif Atlas

Geometric match to HL_7A0S_023

Geometric discrepancy: 0.3187

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_91813.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

24

Unit IDs

9TZ9|1|a|C|2810
9TZ9|1|a|U|2811
9TZ9|1|a|U|2812
9TZ9|1|a|U|2813
9TZ9|1|a|A|2814
9TZ9|1|a|A|2815
9TZ9|1|a|G|2816

Current chains

Chain a

23S ribosomal RNA

Nearby chains