HL_9TZE_075
3D structure
- PDB id
- 9TZE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Coxiella burnetii Ribosome with Doxycycline and HPFcold
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9TZE|1|a|A|1794, 9TZE|1|a|C|1795, 9TZE|1|a|U|1796, 9TZE|1|a|A|1800
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TZE_075 not in the Motif Atlas
- Geometric match to HL_8B0X_073
- Geometric discrepancy: 0.0762
- The information below is about HL_8B0X_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 10
Unit IDs
9TZE|1|a|U|1791
9TZE|1|a|U|1792
9TZE|1|a|U|1793
9TZE|1|a|A|1794
9TZE|1|a|C|1795
9TZE|1|a|U|1796
9TZE|1|a|A|1797
9TZE|1|a|A|1798
9TZE|1|a|A|1799
9TZE|1|a|A|1800
9TZE|1|a|A|1801
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain o
- Large ribosomal subunit protein uL2
- Chain y
- Large ribosomal subunit protein bL34
Coloring options: