HL_9UWH_007

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAAAAGA

Length

7 nucleotides

Bulged bases

9UWH|1|A|A|1937, 9UWH|1|A|G|1939

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9UWH_007 not in the Motif Atlas

Geometric match to HL_7ENI_002

Geometric discrepancy: 0.3016

The information below is about HL_7ENI_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19413.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

9

Unit IDs

9UWH|1|A|U|1934
9UWH|1|A|A|1935
9UWH|1|A|A|1936
9UWH|1|A|A|1937
9UWH|1|A|A|1938
9UWH|1|A|G|1939
9UWH|1|A|A|1940

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 5

Large ribosomal subunit protein mL37

Chain A3

Small ribosomal subunit protein mS38

Chain D

Large ribosomal subunit protein uL2m