HL_9UWH_029

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUAACU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9UWH_029 not in the Motif Atlas

Geometric match to HL_6N2V_002

Geometric discrepancy: 0.111

The information below is about HL_6N2V_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9UWH|1|A|A|2902
9UWH|1|A|U|2903
9UWH|1|A|A|2904
9UWH|1|A|A|2905
9UWH|1|A|C|2906
9UWH|1|A|U|2907

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL33m

Chain 3

Large ribosomal subunit protein bL35m