HL_9UWH_034

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9UWH_034 not in the Motif Atlas

Geometric match to HL_2R8S_001

Geometric discrepancy: 0.0916

The information below is about HL_2R8S_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9UWH|1|A|C|3126
9UWH|1|A|G|3127
9UWH|1|A|A|3128
9UWH|1|A|A|3129
9UWH|1|A|A|3130
9UWH|1|A|G|3131

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains