HL_9UWH_046

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUGUAAAAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9UWH_046 not in the Motif Atlas

Geometric match to HL_8B0X_014

Geometric discrepancy: 0.245

The information below is about HL_8B0X_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

9UWH|1|AA|U|989
9UWH|1|AA|U|990
9UWH|1|AA|G|991
9UWH|1|AA|U|992
9UWH|1|AA|A|993
9UWH|1|AA|A|994
9UWH|1|AA|A|995
9UWH|1|AA|A|996
9UWH|1|AA|A|997
9UWH|1|AA|A|998

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AF

Small ribosomal subunit protein uS7m

Chain AI

Small ribosomal subunit protein uS11m

Chain AQ

MRPS21 isoform 1