HL_9UWH_051

3D structure

PDB id

9UWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosome trapped by retapamulin

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

9UWH|1|AA|C|1225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9UWH_051 not in the Motif Atlas

Homologous match to HL_6CZR_092

Geometric discrepancy: 0.3678

The information below is about HL_6CZR_092

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.3

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

9UWH|1|AA|G|1217
9UWH|1|AA|A|1218
9UWH|1|AA|U|1219
9UWH|1|AA|A|1220
9UWH|1|AA|A|1221
9UWH|1|AA|A|1222
9UWH|1|AA|C|1223
9UWH|1|AA|C|1224
9UWH|1|AA|C|1225
9UWH|1|AA|C|1226

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AG

Small ribosomal subunit protein uS9m

Chain AH

Small ribosomal subunit protein uS10m

Chain Ax

P/P-tRNA