HL_9VXN_082

3D structure

PDB id

9VXN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.51 Å

Loop

Sequence

CCCCCGUG

Length

8 nucleotides

Bulged bases

9VXN|1|S2|C|324, 9VXN|1|S2|C|325

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9VXN|1|S2|C|322
9VXN|1|S2|C|323
9VXN|1|S2|C|324
9VXN|1|S2|C|325
9VXN|1|S2|C|326
9VXN|1|S2|G|327
9VXN|1|S2|U|328
9VXN|1|S2|G|329

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

Large ribosomal subunit protein eL24

Chain SG

Small ribosomal subunit protein eS6