HL_9WNR_037
3D structure
- PDB id
- 9WNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- UUCGGGA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNR_037 not in the Motif Atlas
- Homologous match to HL_3FOZ_005
- Geometric discrepancy: 0.5991
- The information below is about HL_3FOZ_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37569.3
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9WNR|1|Y|U|33
9WNR|1|Y|U|34
9WNR|1|Y|C|35
9WNR|1|Y|G|36
9WNR|1|Y|G|37
9WNR|1|Y|G|38
9WNR|1|Y|A|39
Current chains
- Chain Y
- P-tRNA(PRO), A-tRNA(PRO)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain I
- 30S ribosomal protein S9
- Chain X
- Transfer RNA; tRNA
- Chain x
- mRNA
Coloring options: