3D structure

PDB id
9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.48 Å

Loop

Sequence
CUCCCUCG
Length
8 nucleotides
Bulged bases
9WW4|1|AA|C|5023, 9WW4|1|AA|U|5026
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW4|1|AA|C|5021
9WW4|1|AA|U|5022
9WW4|1|AA|C|5023
9WW4|1|AA|C|5024
9WW4|1|AA|C|5025
9WW4|1|AA|U|5026
9WW4|1|AA|C|5027
9WW4|1|AA|G|5028

Current chains

Chain AA
28S rRNA (3773-MER)

Nearby chains

Chain AW
60S ribosomal protein L22
Chain BH
40S ribosomal protein S8

Coloring options:

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