HL_9WW4_102

3D structure

PDB id

9WW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GAUUGAUAGCUC

Length

12 nucleotides

Bulged bases

9WW4|1|BA|U|1300, 9WW4|1|BA|G|1302

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW4|1|BA|G|1294
9WW4|1|BA|A|1295
9WW4|1|BA|U|1296
9WW4|1|BA|U|1297
9WW4|1|BA|G|1298
9WW4|1|BA|A|1299
9WW4|1|BA|U|1300
9WW4|1|BA|A|1301
9WW4|1|BA|G|1302
9WW4|1|BA|C|1303
9WW4|1|BA|U|1304
9WW4|1|BA|C|1305

Current chains

Chain BA

18S rRNA (1740-MER)

Nearby chains

Chain BK

40S ribosomal protein S15

Chain BT

40S ribosomal protein S29

Chain Bg

Ubiquitin-40S ribosomal protein S27a