HL_9WW4_110

3D structure

PDB id

9WW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GGGGUCGGCCCACGGCC

Length

17 nucleotides

Bulged bases

9WW4|1|BA|G|1760, 9WW4|1|BA|C|1762, 9WW4|1|BA|G|1763, 9WW4|1|BA|G|1764, 9WW4|1|BA|C|1765, 9WW4|1|BA|C|1766, 9WW4|1|BA|C|1767, 9WW4|1|BA|A|1768, 9WW4|1|BA|C|1769, 9WW4|1|BA|G|1770, 9WW4|1|BA|G|1771, 9WW4|1|BA|C|1772

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW4|1|BA|G|1757
9WW4|1|BA|G|1758
9WW4|1|BA|G|1759
9WW4|1|BA|G|1760
9WW4|1|BA|U|1761
9WW4|1|BA|C|1762
9WW4|1|BA|G|1763
9WW4|1|BA|G|1764
9WW4|1|BA|C|1765
9WW4|1|BA|C|1766
9WW4|1|BA|C|1767
9WW4|1|BA|A|1768
9WW4|1|BA|C|1769
9WW4|1|BA|G|1770
9WW4|1|BA|G|1771
9WW4|1|BA|C|1772
9WW4|1|BA|C|1773

Current chains

Chain BA

18S rRNA (1740-MER)

Nearby chains