HL_9WW6_013

3D structure

PDB id

9WW6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome delta eL41 non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CCCGAAGAGGGG

Length

12 nucleotides

Bulged bases

9WW6|1|AA|C|1252, 9WW6|1|AA|A|1254, 9WW6|1|AA|A|1255, 9WW6|1|AA|G|1256, 9WW6|1|AA|A|1257

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW6|1|AA|C|1250
9WW6|1|AA|C|1251
9WW6|1|AA|C|1252
9WW6|1|AA|G|1253
9WW6|1|AA|A|1254
9WW6|1|AA|A|1255
9WW6|1|AA|G|1256
9WW6|1|AA|A|1257
9WW6|1|AA|G|1258
9WW6|1|AA|G|1259
9WW6|1|AA|G|1260
9WW6|1|AA|G|1261

Current chains

Chain AA

28S rRNA (3773-MER)

Nearby chains