3D structure

PDB id
9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome delta eL41 non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GCGAAAGAC
Length
9 nucleotides
Bulged bases
9WW6|1|AA|A|1630, 9WW6|1|AA|G|1633
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW6|1|AA|G|1627
9WW6|1|AA|C|1628
9WW6|1|AA|G|1629
9WW6|1|AA|A|1630
9WW6|1|AA|A|1631
9WW6|1|AA|A|1632
9WW6|1|AA|G|1633
9WW6|1|AA|A|1634
9WW6|1|AA|C|1635

Current chains

Chain AA
28S rRNA (3773-MER)

Nearby chains

Chain AD
60S ribosomal protein L8
Chain AP
60S ribosomal protein L15
Chain Al
60S ribosomal protein L37

Coloring options:

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