HL_9WW6_028
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- UAUAGACAGCAGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUGUGUAACAACUCACCUGCCGAA
- Length
- 70 nucleotides
- Bulged bases
- 9WW6|1|AA|A|1960, 9WW6|1|AA|A|1970, 9WW6|1|AA|C|1971, 9WW6|1|AA|G|1972, 9WW6|1|AA|G|1975, 9WW6|1|AA|G|1981, 9WW6|1|AA|A|1984, 9WW6|1|AA|C|1987, 9WW6|1|AA|G|1988, 9WW6|1|AA|G|1989, 9WW6|1|AA|A|1990, 9WW6|1|AA|A|1991, 9WW6|1|AA|U|1992, 9WW6|1|AA|G|1995, 9WW6|1|AA|U|1997, 9WW6|1|AA|U|2004, 9WW6|1|AA|U|2006, 9WW6|1|AA|G|2007, 9WW6|1|AA|A|2009, 9WW6|1|AA|C|2011, 9WW6|1|AA|A|2013, 9WW6|1|AA|U|2015, 9WW6|1|AA|C|2018
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|AA|U|1957
9WW6|1|AA|A|1958
9WW6|1|AA|U|1959
9WW6|1|AA|A|1960
9WW6|1|AA|G|1961
9WW6|1|AA|A|1962
9WW6|1|AA|C|1963
9WW6|1|AA|A|1964
9WW6|1|AA|G|1965
9WW6|1|AA|C|1966
9WW6|1|AA|A|1967
9WW6|1|AA|G|1968
9WW6|1|AA|G|1969
9WW6|1|AA|A|1970
9WW6|1|AA|C|1971
9WW6|1|AA|G|1972
9WW6|1|AA|G|1973
9WW6|1|AA|U|1974
9WW6|1|AA|G|1975
9WW6|1|AA|G|1976
9WW6|1|AA|C|1977
9WW6|1|AA|C|1978
9WW6|1|AA|A|1979
9WW6|1|AA|U|1980
9WW6|1|AA|G|1981
9WW6|1|AA|G|1982
9WW6|1|AA|A|1983
9WW6|1|AA|A|1984
9WW6|1|AA|G|1985
9WW6|1|AA|U|1986
9WW6|1|AA|C|1987
9WW6|1|AA|G|1988
9WW6|1|AA|G|1989
9WW6|1|AA|A|1990
9WW6|1|AA|A|1991
9WW6|1|AA|U|1992
9WW6|1|AA|C|1993
9WW6|1|AA|C|1994
9WW6|1|AA|G|1995
9WW6|1|AA|C|1996
9WW6|1|AA|U|1997
9WW6|1|AA|A|1998
9WW6|1|AA|A|1999
9WW6|1|AA|G|2000
9WW6|1|AA|G|2001
9WW6|1|AA|A|2002
9WW6|1|AA|G|2003
9WW6|1|AA|U|2004
9WW6|1|AA|G|2005
9WW6|1|AA|U|2006
9WW6|1|AA|G|2007
9WW6|1|AA|U|2008
9WW6|1|AA|A|2009
9WW6|1|AA|A|2010
9WW6|1|AA|C|2011
9WW6|1|AA|A|2012
9WW6|1|AA|A|2013
9WW6|1|AA|C|2014
9WW6|1|AA|U|2015
9WW6|1|AA|C|2016
9WW6|1|AA|A|2017
9WW6|1|AA|C|2018
9WW6|1|AA|C|2019
9WW6|1|AA|U|2020
9WW6|1|AA|G|2021
9WW6|1|AA|C|2022
9WW6|1|AA|C|2023
9WW6|1|AA|G|2024
9WW6|1|AA|A|2025
9WW6|1|AA|A|2026
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AK
- 60S ribosomal protein L9
- Chain AL
- Ribosomal protein uL16-like
- Chain AU
- 60S ribosomal protein L18a
- Chain Ao
- Ubiquitin-60S ribosomal protein L40
Coloring options: