HL_9WW6_052
3D structure
- PDB id
- 9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome delta eL41 non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- GAGACAUGAGAGGUGUAGAAUAAGUGGGAGGCCCCCGGCGCCCCCCCGGUGUCCCCGCGAGGGGCCCGGGGCGGGGUCCGCCGGCCCUGCGGGCCGCCGGUGAAAUACCACUACUCUGAUCGUUUU
- Length
- 126 nucleotides
- Bulged bases
- 9WW6|1|AA|A|3947, 9WW6|1|AA|G|3953, 9WW6|1|AA|G|3958, 9WW6|1|AA|U|3959, 9WW6|1|AA|A|3960, 9WW6|1|AA|A|3962, 9WW6|1|AA|A|3963, 9WW6|1|AA|U|3964, 9WW6|1|AA|A|3966, 9WW6|1|AA|G|3967, 9WW6|1|AA|G|3969, 9WW6|1|AA|G|3970, 9WW6|1|AA|A|3972, 9WW6|1|AA|C|3978, 9WW6|1|AA|C|3979, 9WW6|1|AA|G|3980, 9WW6|1|AA|G|3981, 9WW6|1|AA|C|3982, 9WW6|1|AA|G|3983, 9WW6|1|AA|C|3984, 9WW6|1|AA|C|3985, 9WW6|1|AA|C|3986, 9WW6|1|AA|C|3987, 9WW6|1|AA|C|3988, 9WW6|1|AA|C|3989, 9WW6|1|AA|C|3990, 9WW6|1|AA|G|3991, 9WW6|1|AA|G|3992, 9WW6|1|AA|U|3993, 9WW6|1|AA|G|3994, 9WW6|1|AA|U|3995, 9WW6|1|AA|C|3996, 9WW6|1|AA|C|3997, 9WW6|1|AA|C|3998, 9WW6|1|AA|C|3999, 9WW6|1|AA|G|4000, 9WW6|1|AA|C|4001, 9WW6|1|AA|G|4002, 9WW6|1|AA|A|4003, 9WW6|1|AA|G|4004, 9WW6|1|AA|G|4005, 9WW6|1|AA|G|4006, 9WW6|1|AA|G|4007, 9WW6|1|AA|C|4008, 9WW6|1|AA|C|4009, 9WW6|1|AA|C|4010, 9WW6|1|AA|G|4011, 9WW6|1|AA|G|4012, 9WW6|1|AA|G|4013, 9WW6|1|AA|G|4014, 9WW6|1|AA|C|4015, 9WW6|1|AA|G|4016, 9WW6|1|AA|G|4017, 9WW6|1|AA|G|4018, 9WW6|1|AA|G|4019, 9WW6|1|AA|U|4020, 9WW6|1|AA|C|4021, 9WW6|1|AA|C|4022, 9WW6|1|AA|G|4023, 9WW6|1|AA|C|4024, 9WW6|1|AA|C|4025, 9WW6|1|AA|G|4026, 9WW6|1|AA|G|4027, 9WW6|1|AA|C|4028, 9WW6|1|AA|C|4029, 9WW6|1|AA|C|4030, 9WW6|1|AA|U|4031, 9WW6|1|AA|G|4032, 9WW6|1|AA|C|4033, 9WW6|1|AA|G|4035, 9WW6|1|AA|G|4036, 9WW6|1|AA|C|4038, 9WW6|1|AA|G|4039, 9WW6|1|AA|C|4040, 9WW6|1|AA|C|4041, 9WW6|1|AA|G|4042, 9WW6|1|AA|U|4044, 9WW6|1|AA|G|4045, 9WW6|1|AA|U|4049, 9WW6|1|AA|C|4052, 9WW6|1|AA|A|4053, 9WW6|1|AA|C|4054, 9WW6|1|AA|A|4056, 9WW6|1|AA|C|4057, 9WW6|1|AA|U|4058, 9WW6|1|AA|G|4061, 9WW6|1|AA|G|4065
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW6|1|AA|G|3944
9WW6|1|AA|A|3945
9WW6|1|AA|G|3946
9WW6|1|AA|A|3947
9WW6|1|AA|C|3948
9WW6|1|AA|A|3949
9WW6|1|AA|U|3950
9WW6|1|AA|G|3951
9WW6|1|AA|A|3952
9WW6|1|AA|G|3953
9WW6|1|AA|A|3954
9WW6|1|AA|G|3955
9WW6|1|AA|G|3956
9WW6|1|AA|U|3957
9WW6|1|AA|G|3958
9WW6|1|AA|U|3959
9WW6|1|AA|A|3960
9WW6|1|AA|G|3961
9WW6|1|AA|A|3962
9WW6|1|AA|A|3963
9WW6|1|AA|U|3964
9WW6|1|AA|A|3965
9WW6|1|AA|A|3966
9WW6|1|AA|G|3967
9WW6|1|AA|U|3968
9WW6|1|AA|G|3969
9WW6|1|AA|G|3970
9WW6|1|AA|G|3971
9WW6|1|AA|A|3972
9WW6|1|AA|G|3973
9WW6|1|AA|G|3974
9WW6|1|AA|C|3975
9WW6|1|AA|C|3976
9WW6|1|AA|C|3977
9WW6|1|AA|C|3978
9WW6|1|AA|C|3979
9WW6|1|AA|G|3980
9WW6|1|AA|G|3981
9WW6|1|AA|C|3982
9WW6|1|AA|G|3983
9WW6|1|AA|C|3984
9WW6|1|AA|C|3985
9WW6|1|AA|C|3986
9WW6|1|AA|C|3987
9WW6|1|AA|C|3988
9WW6|1|AA|C|3989
9WW6|1|AA|C|3990
9WW6|1|AA|G|3991
9WW6|1|AA|G|3992
9WW6|1|AA|U|3993
9WW6|1|AA|G|3994
9WW6|1|AA|U|3995
9WW6|1|AA|C|3996
9WW6|1|AA|C|3997
9WW6|1|AA|C|3998
9WW6|1|AA|C|3999
9WW6|1|AA|G|4000
9WW6|1|AA|C|4001
9WW6|1|AA|G|4002
9WW6|1|AA|A|4003
9WW6|1|AA|G|4004
9WW6|1|AA|G|4005
9WW6|1|AA|G|4006
9WW6|1|AA|G|4007
9WW6|1|AA|C|4008
9WW6|1|AA|C|4009
9WW6|1|AA|C|4010
9WW6|1|AA|G|4011
9WW6|1|AA|G|4012
9WW6|1|AA|G|4013
9WW6|1|AA|G|4014
9WW6|1|AA|C|4015
9WW6|1|AA|G|4016
9WW6|1|AA|G|4017
9WW6|1|AA|G|4018
9WW6|1|AA|G|4019
9WW6|1|AA|U|4020
9WW6|1|AA|C|4021
9WW6|1|AA|C|4022
9WW6|1|AA|G|4023
9WW6|1|AA|C|4024
9WW6|1|AA|C|4025
9WW6|1|AA|G|4026
9WW6|1|AA|G|4027
9WW6|1|AA|C|4028
9WW6|1|AA|C|4029
9WW6|1|AA|C|4030
9WW6|1|AA|U|4031
9WW6|1|AA|G|4032
9WW6|1|AA|C|4033
9WW6|1|AA|G|4034
9WW6|1|AA|G|4035
9WW6|1|AA|G|4036
9WW6|1|AA|C|4037
9WW6|1|AA|C|4038
9WW6|1|AA|G|4039
9WW6|1|AA|C|4040
9WW6|1|AA|C|4041
9WW6|1|AA|G|4042
9WW6|1|AA|G|4043
9WW6|1|AA|U|4044
9WW6|1|AA|G|4045
9WW6|1|AA|A|4046
9WW6|1|AA|A|4047
9WW6|1|AA|A|4048
9WW6|1|AA|U|4049
9WW6|1|AA|A|4050
9WW6|1|AA|C|4051
9WW6|1|AA|C|4052
9WW6|1|AA|A|4053
9WW6|1|AA|C|4054
9WW6|1|AA|U|4055
9WW6|1|AA|A|4056
9WW6|1|AA|C|4057
9WW6|1|AA|U|4058
9WW6|1|AA|C|4059
9WW6|1|AA|U|4060
9WW6|1|AA|G|4061
9WW6|1|AA|A|4062
9WW6|1|AA|U|4063
9WW6|1|AA|C|4064
9WW6|1|AA|G|4065
9WW6|1|AA|U|4066
9WW6|1|AA|U|4067
9WW6|1|AA|U|4068
9WW6|1|AA|U|4069
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain Ak
- 60S ribosomal protein L36
- Chain BD
- 40S ribosomal protein S3a
Coloring options: