3D structure

PDB id
9WW6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human 80S ribosome delta eL41 non-rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
AGGUGAAAU(PSU)
Length
10 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9WW6|1|BA|A|957
9WW6|1|BA|G|958
9WW6|1|BA|G|959
9WW6|1|BA|U|960
9WW6|1|BA|G|961
9WW6|1|BA|A|962
9WW6|1|BA|A|963
9WW6|1|BA|A|964
9WW6|1|BA|U|965
9WW6|1|BA|PSU|966

Current chains

Chain BA
18S rRNA (1740-MER)

Nearby chains

Chain BF
40S ribosomal protein S5
Chain Ba
Small ribosomal subunit protein uS11

Coloring options:

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