HL_9WW6_108

3D structure

PDB id

9WW6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome delta eL41 non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GGGGUCGGCCCACGGCC

Length

17 nucleotides

Bulged bases

9WW6|1|BA|G|1760, 9WW6|1|BA|C|1762, 9WW6|1|BA|G|1763, 9WW6|1|BA|G|1764, 9WW6|1|BA|C|1765, 9WW6|1|BA|C|1766, 9WW6|1|BA|C|1767, 9WW6|1|BA|A|1768, 9WW6|1|BA|C|1769, 9WW6|1|BA|G|1770, 9WW6|1|BA|G|1771, 9WW6|1|BA|C|1772

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WW6|1|BA|G|1757
9WW6|1|BA|G|1758
9WW6|1|BA|G|1759
9WW6|1|BA|G|1760
9WW6|1|BA|U|1761
9WW6|1|BA|C|1762
9WW6|1|BA|G|1763
9WW6|1|BA|G|1764
9WW6|1|BA|C|1765
9WW6|1|BA|C|1766
9WW6|1|BA|C|1767
9WW6|1|BA|A|1768
9WW6|1|BA|C|1769
9WW6|1|BA|G|1770
9WW6|1|BA|G|1771
9WW6|1|BA|C|1772
9WW6|1|BA|C|1773

Current chains

Chain BA

18S rRNA (1740-MER)

Nearby chains