HL_9XFK_027

3D structure

PDB id

9XFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

GUUGGCUUAGAAGCAGCCAUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XFK|1|I|G|1059
9XFK|1|I|U|1060
9XFK|1|I|U|1061
9XFK|1|I|G|1062
9XFK|1|I|G|1063
9XFK|1|I|C|1064
9XFK|1|I|U|1065
9XFK|1|I|U|1066
9XFK|1|I|A|1067
9XFK|1|I|G|1068
9XFK|1|I|A|1069
9XFK|1|I|A|1070
9XFK|1|I|G|1071
9XFK|1|I|C|1072
9XFK|1|I|A|1073
9XFK|1|I|G|1074
9XFK|1|I|C|1075
9XFK|1|I|C|1076
9XFK|1|I|A|1077
9XFK|1|I|U|1078
9XFK|1|I|C|1079

Current chains

Chain I

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L11

Chain U

Large ribosomal subunit protein uL16