HL_9XFK_044
3D structure
- PDB id
- 9XFK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of bacterial 50S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9XFK|1|I|A|1780, 9XFK|1|I|U|1781, 9XFK|1|I|U|1782, 9XFK|1|I|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9XFK_044 not in the Motif Atlas
- Geometric match to HL_8B0X_073
- Geometric discrepancy: 0.0641
- The information below is about HL_8B0X_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 10
Unit IDs
9XFK|1|I|U|1777
9XFK|1|I|U|1778
9XFK|1|I|U|1779
9XFK|1|I|A|1780
9XFK|1|I|U|1781
9XFK|1|I|U|1782
9XFK|1|I|A|1783
9XFK|1|I|A|1784
9XFK|1|I|A|1785
9XFK|1|I|A|1786
9XFK|1|I|A|1787
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain K
- Large ribosomal subunit protein uL2
- Chain k
- 50S ribosomal protein L34
Coloring options: