HL_9XFK_054

3D structure

PDB id

9XFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

9XFK|1|I|A|2311

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9XFK|1|I|G|2303
9XFK|1|I|G|2304
9XFK|1|I|U|2305
9XFK|1|I|C|2306
9XFK|1|I|G|2307
9XFK|1|I|G|2308
9XFK|1|I|A|2309
9XFK|1|I|C|2310
9XFK|1|I|A|2311
9XFK|1|I|U|2312
9XFK|1|I|C|2313

Current chains

Chain I

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L5