HL_9XFL_021

3D structure

PDB id

9XFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9XFL_021 not in the Motif Atlas

Geometric match to HL_8B0X_052

Geometric discrepancy: 0.2064

The information below is about HL_8B0X_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9XFL|1|I|G|712
9XFL|1|I|G|713
9XFL|1|I|U|714
9XFL|1|I|A|715
9XFL|1|I|A|716
9XFL|1|I|C|717
9XFL|1|I|A|718
9XFL|1|I|C|719

Current chains

Chain I

23S rRNA

Nearby chains