HL_9XFL_051

3D structure

PDB id

9XFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro structure of bacterial 50S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.16 Å

Loop

Sequence

GUAAUCC

Length

7 nucleotides

Bulged bases

9XFL|1|I|A|2211, 9XFL|1|I|U|2213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9XFL_051 not in the Motif Atlas

Geometric match to HL_8B0X_079

Geometric discrepancy: 0.0657

The information below is about HL_8B0X_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42293.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

5

Unit IDs

9XFL|1|I|G|2209
9XFL|1|I|U|2210
9XFL|1|I|A|2211
9XFL|1|I|A|2212
9XFL|1|I|U|2213
9XFL|1|I|C|2214
9XFL|1|I|C|2215

Current chains

Chain I

23S rRNA

Nearby chains

Chain K

Large ribosomal subunit protein uL2