HL_9XTE_008
3D structure
- PDB id
- 9XTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli delta lepA 30S ribosomal subunit class A, body domain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.24 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9XTE_008 not in the Motif Atlas
- Homologous match to HL_6CZR_079
- Geometric discrepancy: 0.1459
- The information below is about HL_6CZR_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.2
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9XTE|1|A|A|320
9XTE|1|A|A|321
9XTE|1|A|C|322
9XTE|1|A|U|323
9XTE|1|A|G|324
9XTE|1|A|A|325
9XTE|1|A|G|326
9XTE|1|A|A|327
9XTE|1|A|C|328
9XTE|1|A|A|329
9XTE|1|A|C|330
9XTE|1|A|G|331
9XTE|1|A|G|332
9XTE|1|A|U|333
Current chains
- Chain A
- RNA (1026-MER)
Nearby chains
- Chain P
- Small ribosomal subunit protein bS16
- Chain T
- 30S ribosomal protein S20
Coloring options: