HL_9XTE_012

3D structure

PDB id

9XTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class A, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9XTE|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9XTE_012 not in the Motif Atlas

Geometric match to HL_8B0X_011

Geometric discrepancy: 0.1875

The information below is about HL_8B0X_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9XTE|1|A|G|462
9XTE|1|A|U|463
9XTE|1|A|U|464
9XTE|1|A|A|465
9XTE|1|A|A|466
9XTE|1|A|U|467
9XTE|1|A|A|468
9XTE|1|A|C|469
9XTE|1|A|C|470

Current chains

Chain A

RNA (1026-MER)

Nearby chains