HL_9XTE_023

3D structure

PDB id

9XTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class A, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9XTE_023 not in the Motif Atlas

Homologous match to HL_6CZR_103

Geometric discrepancy: 0.4288

The information below is about HL_6CZR_103

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

9XTE|1|A|G|1515
9XTE|1|A|G|1516
9XTE|1|A|G|1517
9XTE|1|A|A|1518
9XTE|1|A|A|1519
9XTE|1|A|C|1520

Current chains

Chain A

RNA (1026-MER)

Nearby chains