HL_9Y49_013

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGCGGGACCGAAACCCCC

Length

18 nucleotides

Bulged bases

9Y49|1|A5|G|888, 9Y49|1|A5|C|889, 9Y49|1|A5|G|890, 9Y49|1|A5|G|891, 9Y49|1|A5|G|892, 9Y49|1|A5|A|893, 9Y49|1|A5|C|894, 9Y49|1|A5|C|895, 9Y49|1|A5|G|896, 9Y49|1|A5|A|897, 9Y49|1|A5|A|898, 9Y49|1|A5|A|899, 9Y49|1|A5|C|900, 9Y49|1|A5|C|901

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A5|G|759
9Y49|1|A5|G|888
9Y49|1|A5|C|889
9Y49|1|A5|G|890
9Y49|1|A5|G|891
9Y49|1|A5|G|892
9Y49|1|A5|A|893
9Y49|1|A5|C|894
9Y49|1|A5|C|895
9Y49|1|A5|G|896
9Y49|1|A5|A|897
9Y49|1|A5|A|898
9Y49|1|A5|A|899
9Y49|1|A5|C|900
9Y49|1|A5|C|901
9Y49|1|A5|C|902
9Y49|1|A5|C|903
9Y49|1|A5|C|904

Current chains

Chain A5

LSU-alpha rRNA (1722-MER)

Nearby chains