HL_9Y49_014

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCCCACCGGGCGC

Length

13 nucleotides

Bulged bases

9Y49|1|A5|C|997, 9Y49|1|A5|C|998, 9Y49|1|A5|C|999, 9Y49|1|A5|A|1000, 9Y49|1|A5|C|1001, 9Y49|1|A5|C|1002, 9Y49|1|A5|G|1042, 9Y49|1|A5|G|1043, 9Y49|1|A5|G|1044, 9Y49|1|A5|C|1045

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A5|G|996
9Y49|1|A5|C|997
9Y49|1|A5|C|998
9Y49|1|A5|C|999
9Y49|1|A5|A|1000
9Y49|1|A5|C|1001
9Y49|1|A5|C|1002
9Y49|1|A5|G|1042
9Y49|1|A5|G|1043
9Y49|1|A5|G|1044
9Y49|1|A5|C|1045
9Y49|1|A5|G|1046
9Y49|1|A5|C|1047

Current chains

Chain A5

LSU-alpha rRNA (1722-MER)

Nearby chains

Chain CE

60S ribosomal protein L6