HL_9Y49_015

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUCGGUCG

Length

9 nucleotides

Bulged bases

9Y49|1|A5|C|1110, 9Y49|1|A5|U|1111, 9Y49|1|A5|C|1112, 9Y49|1|A5|G|1157, 9Y49|1|A5|G|1158, 9Y49|1|A5|U|1159, 9Y49|1|A5|C|1160

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A5|C|1109
9Y49|1|A5|C|1110
9Y49|1|A5|U|1111
9Y49|1|A5|C|1112
9Y49|1|A5|G|1157
9Y49|1|A5|G|1158
9Y49|1|A5|U|1159
9Y49|1|A5|C|1160
9Y49|1|A5|G|1161

Current chains

Chain A5

LSU-alpha rRNA (1722-MER)

Nearby chains