HL_9Y49_031

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAGGGAAGUCG

Length

11 nucleotides

Bulged bases

9Y49|1|A5|A|1983, 9Y49|1|A5|A|1984

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A5|C|1978
9Y49|1|A5|A|1979
9Y49|1|A5|G|1980
9Y49|1|A5|G|1981
9Y49|1|A5|G|1982
9Y49|1|A5|A|1983
9Y49|1|A5|A|1984
9Y49|1|A5|G|1985
9Y49|1|A5|U|1986
9Y49|1|A5|C|1987
9Y49|1|A5|G|1988

Current chains

Chain A5

LSU-alpha rRNA (1722-MER)

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain Ct

Elongation factor 2