HL_9Y49_056

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCCGGCGCCCCGGGGCGGGCCUGCG

Length

25 nucleotides

Bulged bases

9Y49|1|A6|C|3978, 9Y49|1|A6|C|3979, 9Y49|1|A6|G|3980, 9Y49|1|A6|G|3981, 9Y49|1|A6|C|3982, 9Y49|1|A6|G|3983, 9Y49|1|A6|C|3984, 9Y49|1|A6|C|3985, 9Y49|1|A6|C|3986, 9Y49|1|A6|C|3987, 9Y49|1|A6|G|4011, 9Y49|1|A6|G|4012, 9Y49|1|A6|G|4013, 9Y49|1|A6|G|4014, 9Y49|1|A6|C|4015, 9Y49|1|A6|G|4016, 9Y49|1|A6|G|4017, 9Y49|1|A6|G|4018, 9Y49|1|A6|C|4029, 9Y49|1|A6|C|4030, 9Y49|1|A6|U|4031, 9Y49|1|A6|G|4032, 9Y49|1|A6|C|4033

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|C|3977
9Y49|1|A6|C|3978
9Y49|1|A6|C|3979
9Y49|1|A6|G|3980
9Y49|1|A6|G|3981
9Y49|1|A6|C|3982
9Y49|1|A6|G|3983
9Y49|1|A6|C|3984
9Y49|1|A6|C|3985
9Y49|1|A6|C|3986
9Y49|1|A6|C|3987
9Y49|1|A6|G|4011
9Y49|1|A6|G|4012
9Y49|1|A6|G|4013
9Y49|1|A6|G|4014
9Y49|1|A6|C|4015
9Y49|1|A6|G|4016
9Y49|1|A6|G|4017
9Y49|1|A6|G|4018
9Y49|1|A6|C|4029
9Y49|1|A6|C|4030
9Y49|1|A6|U|4031
9Y49|1|A6|G|4032
9Y49|1|A6|C|4033
9Y49|1|A6|G|4034

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains