HL_9Y49_066

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

9Y49|1|A6|U|4419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|C|4417
9Y49|1|A6|G|4418
9Y49|1|A6|U|4419
9Y49|1|A6|U|4420
9Y49|1|A6|C|4421
9Y49|1|A6|A|4422
9Y49|1|A6|U|4423
9Y49|1|A6|A|4424
9Y49|1|A6|G|4425

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CH

60S ribosomal protein L9

Chain CI

60S ribosomal protein L10-like

Chain Cm

60S ribosomal protein L40

Chain Ct

Elongation factor 2