HL_9Y49_068

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Y49_068 not in the Motif Atlas

Homologous match to HL_9H3G_064

Geometric discrepancy: 0.1518

The information below is about HL_9H3G_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02262.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

36

Unit IDs

9Y49|1|A6|U|4497
9Y49|1|A6|U|4498
9Y49|1|A6|G|4499
9Y49|1|A6|U|4500
9Y49|1|A6|U|4501
9Y49|1|A6|C|4502
9Y49|1|A6|A|4503

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain CB

60S ribosomal protein L3