HL_9Y49_087

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAGCCCCUGGGGCGGGCGCCG

Length

21 nucleotides

Bulged bases

9Y49|1|B2|A|244, 9Y49|1|B2|G|245, 9Y49|1|B2|C|246, 9Y49|1|B2|C|247, 9Y49|1|B2|C|248, 9Y49|1|B2|C|249, 9Y49|1|B2|U|250, 9Y49|1|B2|G|267, 9Y49|1|B2|G|268, 9Y49|1|B2|G|269, 9Y49|1|B2|G|270, 9Y49|1|B2|C|271, 9Y49|1|B2|G|272, 9Y49|1|B2|G|273, 9Y49|1|B2|G|274, 9Y49|1|B2|C|275, 9Y49|1|B2|G|276, 9Y49|1|B2|C|277, 9Y49|1|B2|C|278

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|C|243
9Y49|1|B2|A|244
9Y49|1|B2|G|245
9Y49|1|B2|C|246
9Y49|1|B2|C|247
9Y49|1|B2|C|248
9Y49|1|B2|C|249
9Y49|1|B2|U|250
9Y49|1|B2|G|267
9Y49|1|B2|G|268
9Y49|1|B2|G|269
9Y49|1|B2|G|270
9Y49|1|B2|C|271
9Y49|1|B2|G|272
9Y49|1|B2|G|273
9Y49|1|B2|G|274
9Y49|1|B2|C|275
9Y49|1|B2|G|276
9Y49|1|B2|C|277
9Y49|1|B2|C|278
9Y49|1|B2|G|279

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains