HL_9Y49_106

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAUUCCCAUG

Length

10 nucleotides

Bulged bases

9Y49|1|B2|U|1115, 9Y49|1|B2|C|1116

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|U|1112
9Y49|1|B2|A|1113
9Y49|1|B2|U|1114
9Y49|1|B2|U|1115
9Y49|1|B2|C|1116
9Y49|1|B2|C|1117
9Y49|1|B2|C|1118
9Y49|1|B2|A|1119
9Y49|1|B2|U|1120
9Y49|1|B2|G|1121

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AB

40S ribosomal protein S3a

Chain AR

40S ribosomal protein S17

Chain Ab

40S ribosomal protein S27