HL_9Y49_117

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUCAUAAGC

Length

9 nucleotides

Bulged bases

9Y49|1|B2|C|1660, 9Y49|1|B2|G|1665

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|G|1658
9Y49|1|B2|U|1659
9Y49|1|B2|C|1660
9Y49|1|B2|A|1661
9Y49|1|B2|U|1662
9Y49|1|B2|A|1663
9Y49|1|B2|A|1664
9Y49|1|B2|G|1665
9Y49|1|B2|C|1666

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AD

40S ribosomal protein S3

Chain AQ

40S ribosomal protein S16

Chain AT

40S ribosomal protein S19

Chain AU

40S ribosomal protein S20

Chain Ad

40S ribosomal protein S29