HL_9YDC_043
3D structure
- PDB id
- 9YDC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with A/P, P/E tRNAs from uL16 P-site loop mutants in bypass condition
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 9YDC|1|A|A|2256
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YDC|1|A|G|2253
9YDC|1|A|U|2254
9YDC|1|A|A|2255
9YDC|1|A|A|2256
9YDC|1|A|C|2257
9YDC|1|A|U|2258
9YDC|1|A|A|2259
9YDC|1|A|U|2260
9YDC|1|A|G|2261
9YDC|1|A|A|2262
9YDC|1|A|C|2263
Current chains
- Chain A
- 25S RNA
Nearby chains
- Chain D
- messenger RNA
- Chain E
- Small subunit ribosomal RNA; SSU rRNA
- Chain m
- Transfer RNA; tRNA
Coloring options: