HL_9YDE_078
3D structure
- PDB id
- 9YDE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with P/P tRNA from uL16 P-site loop mutants in bypass condition
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 9YDE|1|E|C|402, 9YDE|1|E|G|403
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YDE|1|E|C|393
9YDE|1|E|C|394
9YDE|1|E|U|395
9YDE|1|E|G|396
9YDE|1|E|A|397
9YDE|1|E|G|398
9YDE|1|E|A|399
9YDE|1|E|A|400
9YDE|1|E|A|401
9YDE|1|E|C|402
9YDE|1|E|G|403
9YDE|1|E|G|404
Current chains
- Chain E
- 18S rRNA
Nearby chains
- Chain SS
- 40S ribosomal protein S4-A
- Chain ST
- 40S ribosomal protein S6-A
- Chain SV
- 40S ribosomal protein S8-A
- Chain Sd
- 40S ribosomal protein S24-A
Coloring options: