HL_9YPG_072
3D structure
- PDB id
- 9YPG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GTPBP1*GCP*Phe-tRNA*ribosome in the GTPase activation-like state, Structure III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUGUUCA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9YPG_072 not in the Motif Atlas
- Homologous match to HL_9H3G_064
- Geometric discrepancy: 0.084
- The information below is about HL_9H3G_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02262.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 38
Unit IDs
9YPG|1|5|U|4497
9YPG|1|5|U|4498
9YPG|1|5|G|4499
9YPG|1|5|U|4500
9YPG|1|5|U|4501
9YPG|1|5|C|4502
9YPG|1|5|A|4503
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein L3
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