HL_9YPT_033

3D structure

PDB id

9YPT (explore in PDB, NAKB, or RNA 3D Hub)

Description

GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIc

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAAACG

Length

7 nucleotides

Bulged bases

9YPT|1|5|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPT|1|5|C|1763
9YPT|1|5|G|1764
9YPT|1|5|A|1765
9YPT|1|5|A|1766
9YPT|1|5|A|1767
9YPT|1|5|C|1768
9YPT|1|5|G|1769

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain PP

uS19

Chain SS

uS13