HL_9YPV_034

3D structure

PDB id

9YPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAACG

Length

7 nucleotides

Bulged bases

9YPV|1|5|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPV|1|5|C|1763
9YPV|1|5|G|1764
9YPV|1|5|A|1765
9YPV|1|5|A|1766
9YPV|1|5|A|1767
9YPV|1|5|C|1768
9YPV|1|5|G|1769

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain PP

uS19

Chain SS

uS13