HL_9YPV_058

3D structure

PDB id

9YPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUAAUUAAAA

Length

11 nucleotides

Bulged bases

9YPV|1|5|A|3642, 9YPV|1|5|A|3643, 9YPV|1|5|U|3644, 9YPV|1|5|A|3648

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPV|1|5|U|3639
9YPV|1|5|U|3640
9YPV|1|5|U|3641
9YPV|1|5|A|3642
9YPV|1|5|A|3643
9YPV|1|5|U|3644
9YPV|1|5|U|3645
9YPV|1|5|A|3646
9YPV|1|5|A|3647
9YPV|1|5|A|3648
9YPV|1|5|A|3649

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

Ribosomal protein L8

Chain j

Ribosomal protein L37