HL_9YPY_101

3D structure

PDB id

9YPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome with accommodated A-site tRNA, Structure V

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPY|1|9|U|885
9YPY|1|9|A|886
9YPY|1|9|U|887
9YPY|1|9|U|888
9YPY|1|9|U|889
9YPY|1|9|U|890
9YPY|1|9|G|891
9YPY|1|9|U|892
9YPY|1|9|U|893
9YPY|1|9|G|894
9YPY|1|9|G|895
9YPY|1|9|U|896
9YPY|1|9|U|897
9YPY|1|9|U|898
9YPY|1|9|U|899
9YPY|1|9|C|900
9YPY|1|9|G|901

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

40S ribosomal protein S6

Chain LL

Ribosomal protein S11