HL_9YQ0_057

3D structure

PDB id

9YQ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 2, Structure Ib

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

9YQ0|1|5|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ0|1|5|G|3757
9YQ0|1|5|U|3758
9YQ0|1|5|A|3759
9YQ0|1|5|A|3760
9YQ0|1|5|C|3761
9YQ0|1|5|U|3762
9YQ0|1|5|A|3763
9YQ0|1|5|U|3764
9YQ0|1|5|G|3765
9YQ0|1|5|A|3766
9YQ0|1|5|C|3767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 13

Transfer RNA; tRNA

Chain 9

Small subunit ribosomal RNA; SSU rRNA