HL_9YQ0_059

3D structure

PDB id

9YQ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 2, Structure Ib

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

9YQ0|1|5|A|3876, 9YQ0|1|5|A|3877, 9YQ0|1|5|C|3878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ0|1|5|G|3873
9YQ0|1|5|G|3874
9YQ0|1|5|G|3875
9YQ0|1|5|A|3876
9YQ0|1|5|A|3877
9YQ0|1|5|C|3878
9YQ0|1|5|G|3879
9YQ0|1|5|G|3880
9YQ0|1|5|G|3881
9YQ0|1|5|C|3882

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein L3

Chain e

Ribosomal protein L32